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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791672.1_cds_XP_016508399.1_2076
CDS Infomation

[gene=LOC107825983] [db_xref=GeneID:107825983] [protein=putative cyclic nucleotide-gated ion channel 8] [protein_id=XP_016508399.1] [location=join(1359..1666,1869..1980,2834..3070,3245..3829)] [gbkey=CDS]
Sequence

ATGCAGATCTTCGGGGCCTTTTGGTACCTGTTATCTGTCGAACGCAAAGATACATGTTGG
AATGAAGCATGTAGTGAAAATGAGCAGTGCAATGAAAAATTATCTTATCTGTATTGTTCA
CGTGAAGGAAACTTTAATGTGACAGAATGGCAAGAAATTGGTAAGAGTGTTCTTGACGAG
AAATGTTCTGAGGAGGAAAACTTTCAGTATGGAATATATGCAAGAGCTGTAACATCTGGT
GTTCTTAACTCTGAGGATTTCGTTGTCAAATATTGTTTTTGTTTGTGGTGGGGATTGCAG
AATTTGAGCACACTTGGTCAGGGGCTTGAAACCAGTACCTATACTCTGGAAAATCTCTTT
TCAATAATATTGGCCATTTCTGGACTCCTACTATTTGCTCTTCTCATTGGAAACATGCAG
ACCTATCTTCAGTCTCTGACGGTACGCCTTGAGGAAATGAGGGTCAAAAGGCGTGACTCA
GAGCAGTGGATGCATCACAGAGTACTTCCTCCTGAGCTAAGGGAGAGAGTTCGGCGTTAT
GATCAGTACAAATGGCTGGAAACTAGAGGAGTAGATGAAGAGAGTTTGGTGCAAAATCTG
CCAAAAGATCTTAGGAGGGATATTAAGCGGCATCTTTGTTTGAATTTGGTCAGAAGGGTG
CCCTTGTTTGAGAACATGGACGAGAGGTTGCTTGATGCAATCTGTGAGCGGTTGAAACCA
AGTTTATGCACAGAAAATACGTACATAGTTAGGGAAGGGGACCCGGTTGGTGAAATGTTG
TTTATAATCCGTGGTCACCTAGAAAGTGTAACAACTGATGGTGGAAGAAGTGGTTTCTTC
AACAGAGGTATTCTGAAAGAAAATGACTTCTGCGGGGAGGAACTGCTGACATGGGCATTG
GATCCTAAATCCGGTTCAAACTTGCCGCCATCCACTAGGACTGTAAAGGCACTCACAGAA
GTAGAGGCATTTGCCTTAGAAGCAGAGGAAGTGAAGTACATTACATCTCAGTTCAGGCGG
CTGCAGAGTCGACAGGTACAGCACACTTTTAGATTTTACTCGCAGCAATGGAGAACGTGG
GCTGCCAGCTTTATACAAGCTGCATGGCGCCGTCATATGCGGAGAAAAATTGCAGAACTT
CGTCACAATGAAGAATTGGAAGAAGACGACTATAATGAGAACGATGATGGAGAAACGGAG
TTGACACCAATGTTGCATAAAGCTCCAGAGCGACCACGTTAG

Peptide Sequence

PEP ID

XP_016508399.1
PEP Infomation

PREDICTED: putative cyclic nucleotide-gated ion channel 8 [Nicotiana tabacum]
Sequence

MQIFGAFWYLLSVERKDTCWNEACSENEQCNEKLSYLYCSREGNFNVTEWQEIGKSVLDE
KCSEEENFQYGIYARAVTSGVLNSEDFVVKYCFCLWWGLQNLSTLGQGLETSTYTLENLF
SIILAISGLLLFALLIGNMQTYLQSLTVRLEEMRVKRRDSEQWMHHRVLPPELRERVRRY
DQYKWLETRGVDEESLVQNLPKDLRRDIKRHLCLNLVRRVPLFENMDERLLDAICERLKP
SLCTENTYIVREGDPVGEMLFIIRGHLESVTTDGGRSGFFNRGILKENDFCGEELLTWAL
DPKSGSNLPPSTRTVKALTEVEAFALEAEEVKYITSQFRRLQSRQVQHTFRFYSQQWRTW
AASFIQAAWRRHMRRKIAELRHNEELEEDDYNENDDGETELTPMLHKAPERPR

Transcript Sequence

Gene sequence data has not been registered.